Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC138907.8-201ENST00000623981 2256 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AL136520.1-201ENST00000600311 1322 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC024587.1-201ENST00000505925 2157 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 CASC19-260ENST00000641828 2001 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC092634.1-201ENST00000366505 199 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC098592.2-201ENST00000413158 265 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 VN1R31P-201ENST00000417498 730 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 ELOBP4-201ENST00000423418 296 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 GPN3P1-201ENST00000423883 535 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 EMC3-AS1-205ENST00000438698 534 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 RN7SL326P-201ENST00000477493 296 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 PCNAP1-201ENST00000505363 709 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC108157.1-201ENST00000510511 539 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 SNORA70.11-201ENST00000515987 138 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 SNORA70.13-201ENST00000516116 138 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC084851.2-201ENST00000530377 364 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 CKS1BP1-201ENST00000555221 240 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 RN7SL32P-201ENST00000580514 281 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AL137067.2-201ENST00000621202 131 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 MAPK10-350ENST00000641777 965 ntBASIC5.52□□□□□ -1.53
SHFQ7M4L6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHFQ7M4L6 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.52□□□□□ -1.53
SHFQ7M4L6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC092451.3-201ENST00000625067 1343 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 MIR421-201ENST00000365696 85 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 RNU6-40P-201ENST00000384254 107 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 RBBP4P5-201ENST00000398583 1266 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 PEX12P1-201ENST00000400284 1048 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 AL121977.1-201ENST00000401636 979 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 AL354868.1-201ENST00000417077 482 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 RPS7P14-201ENST00000426405 583 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 RPL12P16-201ENST00000431098 498 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 GAPDHP37-201ENST00000442317 968 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 Z83838.1-202ENST00000456225 839 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 RN7SL552P-201ENST00000462094 276 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 RN7SL83P-201ENST00000468131 297 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 RN7SL369P-201ENST00000477138 299 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 RN7SL267P-201ENST00000485107 261 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms