Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SUMO3P55854 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 AC110597.1-201ENST00000562669 3176 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SUMO3P55854 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.94□□□□□ -1.46
SUMO3P55854 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.94□□□□□ -1.46
SUMO3P55854 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
SUMO3P55854 AL391419.1-201ENST00000398901 1275 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.94□□□□□ -1.46
SUMO3P55854 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.94□□□□□ -1.46
SUMO3P55854 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.94□□□□□ -1.46
SUMO3P55854 RPL23AP4-201ENST00000427757 463 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 AL645939.3-201ENST00000435408 225 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AC009237.1-201ENST00000442127 744 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 GAPDHP37-201ENST00000442317 968 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.94□□□□□ -1.46
SUMO3P55854 AC010240.2-201ENST00000445363 1205 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.94□□□□□ -1.46
SUMO3P55854 AL020997.1-201ENST00000446554 349 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 RN7SL393P-201ENST00000463588 296 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AC020898.1-201ENST00000474167 787 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AC068522.1-201ENST00000482895 345 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AC092824.1-201ENST00000483524 576 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AC023818.1-201ENST00000498379 384 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 AC026407.1-201ENST00000518369 204 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 IGHV1-14-201ENST00000523391 241 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SUMO3P55854 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.94□□□□□ -1.46
SUMO3P55854 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.94□□□□□ -1.46
SUMO3P55854 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SUMO3P55854 CYB5AP5-201ENST00000549779 389 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.94□□□□□ -1.46
SUMO3P55854 AC026956.1-201ENST00000558741 396 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.94□□□□□ -1.46
SUMO3P55854 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.94□□□□□ -1.46
SUMO3P55854 AC090826.1-203ENST00000569235 490 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 MIR6503-201ENST00000622884 86 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.94□□□□□ -1.46
SUMO3P55854 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.94□□□□□ -1.46
SUMO3P55854 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 UGT2B26P-201ENST00000508672 1613 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 NCOA4P2-201ENST00000340589 1813 ntBASIC5.94□□□□□ -1.46
SUMO3P55854 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.94□□□□□ -1.46
SUMO3P55854 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SUMO3P55854 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC023245.2-201ENST00000530760 2978 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.93□□□□□ -1.46
SUMO3P55854 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 MIR551B-201ENST00000384984 96 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 RPL12P23-201ENST00000405880 490 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 AC010385.1-201ENST00000412374 256 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SUMO3P55854 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 EXOSC3P1-201ENST00000448649 500 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 VN1R38P-201ENST00000450265 887 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.93□□□□□ -1.46
SUMO3P55854 RPSAP24-201ENST00000461543 873 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.93□□□□□ -1.46
SUMO3P55854 RPL5P14-201ENST00000494197 878 ntBASIC5.93□□□□□ -1.46
SUMO3P55854 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.93□□□□□ -1.46
SUMO3P55854 AC098862.1-201ENST00000504991 413 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms