Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.25□□□□□ -1.25
ITGA4P13612 RN7SL168P-201ENST00000463821 279 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ITGA4P13612 AC105918.1-201ENST00000474399 838 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.25□□□□□ -1.25
ITGA4P13612 RPL21P47-201ENST00000483696 477 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 AC093870.1-201ENST00000506837 213 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.25□□□□□ -1.25
ITGA4P13612 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ITGA4P13612 AC011352.2-201ENST00000514574 1016 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 AC093816.1-201ENST00000515076 913 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC7.25□□□□□ -1.25
ITGA4P13612 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.25□□□□□ -1.25
ITGA4P13612 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.25□□□□□ -1.25
ITGA4P13612 AC009094.1-201ENST00000564443 426 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.25□□□□□ -1.25
ITGA4P13612 AC245052.7-201ENST00000601161 359 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 AC091768.1-201ENST00000609258 930 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 PART1_2.1-201ENST00000612397 250 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 AC012676.3-201ENST00000614983 479 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.25□□□□□ -1.25
ITGA4P13612 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ITGA4P13612 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.25□□□□□ -1.25
ITGA4P13612 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.25□□□□□ -1.25
ITGA4P13612 AC068733.2-201ENST00000605434 1418 ntBASIC7.25□□□□□ -1.25
ITGA4P13612 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ITGA4P13612 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
ITGA4P13612 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ITGA4P13612 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ITGA4P13612 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 FO082842.1-201ENST00000423552 1370 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 CCAT2-201ENST00000630920 1752 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
ITGA4P13612 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 OR5H2-201ENST00000355273 945 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ITGA4P13612 Y_RNA.169-201ENST00000363745 96 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.24□□□□□ -1.25
ITGA4P13612 VN1R31P-201ENST00000417498 730 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.24□□□□□ -1.25
ITGA4P13612 RPP40P1-201ENST00000426762 456 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 BX119904.1-201ENST00000432026 348 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 RPSAP32-201ENST00000432681 526 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 CRYGGP-201ENST00000443337 145 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.24□□□□□ -1.25
ITGA4P13612 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.24□□□□□ -1.25
ITGA4P13612 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC7.24□□□□□ -1.25
ITGA4P13612 AP000916.1-201ENST00000533869 835 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC7.24□□□□□ -1.25
ITGA4P13612 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.24□□□□□ -1.25
ITGA4P13612 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.24□□□□□ -1.25
ITGA4P13612 AC023310.2-201ENST00000553844 547 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.24□□□□□ -1.25
ITGA4P13612 ZNF971P-201ENST00000562068 1249 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 AC010503.3-201ENST00000594355 540 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.24□□□□□ -1.25
ITGA4P13612 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 AC120057.5-201ENST00000623840 154 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.24□□□□□ -1.25
ITGA4P13612 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ITGA4P13612 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 ZNF812P-201ENST00000457674 1694 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 AC096992.2-201ENST00000609553 1684 ntBASIC7.24□□□□□ -1.25
ITGA4P13612 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
ITGA4P13612 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.24□□□□□ -1.25
ITGA4P13612 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ITGA4P13612 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 SMG1P5-202ENST00000529428 4219 ntBASIC7.23□□□□□ -1.25
ITGA4P13612 SMG1P2-201ENST00000566127 4221 ntBASIC7.23□□□□□ -1.25
ITGA4P13612 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 OR56A4-201ENST00000330728 1209 ntBASIC7.23□□□□□ -1.25
ITGA4P13612 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
ITGA4P13612 AC017079.1-201ENST00000333650 415 ntBASIC7.23□□□□□ -1.25
ITGA4P13612 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ITGA4P13612 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.23□□□□□ -1.25
ITGA4P13612 RNA5SP512-201ENST00000364550 120 ntBASIC7.23□□□□□ -1.25
ITGA4P13612 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms