Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.31□□□□□ -1.56
FREM3P0C091 RNU1-88P-201ENST00000459274 128 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 RN7SL214P-201ENST00000487317 265 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.31□□□□□ -1.56
FREM3P0C091 AC096996.1-201ENST00000563813 325 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.31□□□□□ -1.56
FREM3P0C091 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.31□□□□□ -1.56
FREM3P0C091 NPM1P45-201ENST00000583151 559 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.31□□□□□ -1.56
FREM3P0C091 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.31□□□□□ -1.56
FREM3P0C091 AC018659.2-201ENST00000624690 715 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.31□□□□□ -1.56
FREM3P0C091 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.31□□□□□ -1.56
FREM3P0C091 AC103703.1-201ENST00000634783 663 ntBASIC5.31□□□□□ -1.56
FREM3P0C091 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.31□□□□□ -1.56
FREM3P0C091 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
FREM3P0C091 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
FREM3P0C091 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
FREM3P0C091 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FREM3P0C091 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 RNA5SP242-201ENST00000364171 118 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FREM3P0C091 RN7SKP286-201ENST00000410894 299 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 RN7SKP293-201ENST00000411389 296 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.3□□□□□ -1.56
FREM3P0C091 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.3□□□□□ -1.56
FREM3P0C091 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC006335.2-201ENST00000437993 330 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.3□□□□□ -1.56
FREM3P0C091 AP001804.1-201ENST00000526868 919 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 AC125612.1-201ENST00000547580 377 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.3□□□□□ -1.56
FREM3P0C091 GARSP1-201ENST00000570895 719 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.3□□□□□ -1.56
FREM3P0C091 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
FREM3P0C091 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
FREM3P0C091 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.3□□□□□ -1.56
FREM3P0C091 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 RN7SKP78-201ENST00000364711 318 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 AL121977.1-201ENST00000401636 979 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 FMO7P-201ENST00000436045 768 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC006539.1-201ENST00000481419 501 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
FREM3P0C091 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.3□□□□□ -1.56
FREM3P0C091 AC020978.7-201ENST00000575953 1187 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.3□□□□□ -1.56
FREM3P0C091 AL352984.2-201ENST00000611153 546 ntBASIC5.3□□□□□ -1.56
FREM3P0C091 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC5.3□□□□□ -1.56
FREM3P0C091 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FREM3P0C091 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.3□□□□□ -1.56
FREM3P0C091 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FREM3P0C091 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FREM3P0C091 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
FREM3P0C091 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FREM3P0C091 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
FREM3P0C091 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FREM3P0C091 RN7SKP124-201ENST00000364730 341 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 AC016739.1-201ENST00000405359 345 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 AL391361.1-201ENST00000405580 489 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.29□□□□□ -1.56
FREM3P0C091 AC245096.1-201ENST00000413104 546 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.29□□□□□ -1.56
FREM3P0C091 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.29□□□□□ -1.56
FREM3P0C091 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.29□□□□□ -1.56
FREM3P0C091 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.29□□□□□ -1.56
FREM3P0C091 AC104843.2-201ENST00000427666 297 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 HMGB3P24-201ENST00000433260 622 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 SEPT14P12-201ENST00000442280 560 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FREM3P0C091 CCDC11P1-201ENST00000503137 1162 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.29□□□□□ -1.56
FREM3P0C091 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.29□□□□□ -1.56
FREM3P0C091 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FREM3P0C091 MIR6886-201ENST00000619864 61 ntBASIC5.29□□□□□ -1.56
FREM3P0C091 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.29□□□□□ -1.56
FREM3P0C091 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FREM3P0C091 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms