Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RNA5SP350-201ENST00000363298 111 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC092642.1-201ENST00000392417 425 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AL079341.1-201ENST00000404701 1207 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC092634.2-201ENST00000428146 1010 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AK3P5-201ENST00000432033 519 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RPL3P11-201ENST00000434028 1146 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC016724.1-201ENST00000453215 421 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 UOX-201ENST00000471089 899 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 STRADBP1-201ENST00000478954 1281 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC005412.2-201ENST00000492004 341 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC069306.1-201ENST00000507006 843 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC112518.2-201ENST00000508565 425 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 MINOS1P4-201ENST00000515470 318 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RNU6-319P-201ENST00000516025 108 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RN7SKP287-201ENST00000516546 266 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC118942.1-201ENST00000529674 1035 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 OR4A41P-201ENST00000533053 928 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 SETP17-201ENST00000534163 817 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC087894.1-201ENST00000538359 518 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC007068.2-201ENST00000543168 395 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC087888.1-201ENST00000550884 1254 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC036176.3-201ENST00000602456 418 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RPP40P2-201ENST00000603596 712 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 ELOCP35-201ENST00000604289 336 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC093424.1-201ENST00000604999 338 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RNU6-1192P-201ENST00000612197 107 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC024255.1-201ENST00000614376 102 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RNU6-489P-201ENST00000618289 107 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC120349.3-201ENST00000624377 529 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC023245.2-201ENST00000530760 2978 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC092070.2-203ENST00000598377 3644 ntBASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 AC027279.1-201ENST00000568885 4284 ntBASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 RNA5SP382-201ENST00000363355 112 ntBASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 Z86062.1-201ENST00000406773 777 ntBASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 RNU4-27P-201ENST00000410889 139 ntBASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 AC017035.1-201ENST00000411999 1115 ntBASIC6.02□□□□□ -1.45
AMBRA1Q9C0C7 HMGA1P8-201ENST00000414130 321 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms