Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC245054.2-201ENST00000415639 319 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 RPL7AP72-201ENST00000417266 768 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 FTH1P5-201ENST00000425761 545 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 IFNA20P-201ENST00000436840 528 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 HMGB1P18-201ENST00000438801 619 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 RPL17P49-201ENST00000443728 411 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC012307.1-201ENST00000449242 197 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AL392003.2-201ENST00000451015 679 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 MTCO1P42-201ENST00000457379 726 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 MEMO1P3-201ENST00000459811 302 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 TRBV8-2-201ENST00000475637 270 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC017015.1-201ENST00000477387 286 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC027575.1-201ENST00000481064 460 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC106872.3-201ENST00000495104 446 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 Y_RNA.691-201ENST00000516611 103 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 FABP5P7-201ENST00000524732 405 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 LINC01499-203ENST00000530379 555 ntTSL 4 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 NANOGNBP2-201ENST00000544753 553 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 COX5AP2-201ENST00000554418 394 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AL109766.1-201ENST00000555080 552 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC133065.3-201ENST00000577174 1161 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC015674.1-201ENST00000578482 267 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 PDLIM1P3-201ENST00000582370 599 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 RN7SL246P-201ENST00000584467 296 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 MIR3149-201ENST00000584629 83 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AL953862.2-201ENST00000603089 820 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 PRYP3-202ENST00000607210 444 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC016999.2-201ENST00000614692 556 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AL356585.4-201ENST00000623078 1229 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC005691.1-201ENST00000624723 401 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 DBF4P1-201ENST00000412976 1892 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 MAPK10-354ENST00000641823 2732 ntBASIC7.72□□□□□ -1.17
USB1Q9BQ65 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USB1Q9BQ65 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC7.72□□□□□ -1.17
USB1Q9BQ65 GPN1-202ENST00000407583 1395 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USB1Q9BQ65 LARP1BP1-201ENST00000506036 1359 ntBASIC7.71□□□□□ -1.17
USB1Q9BQ65 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
USB1Q9BQ65 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USB1Q9BQ65 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.71□□□□□ -1.17
USB1Q9BQ65 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
USB1Q9BQ65 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
USB1Q9BQ65 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
USB1Q9BQ65 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC7.71□□□□□ -1.17
USB1Q9BQ65 AP003972.1-201ENST00000625192 5446 ntBASIC7.71□□□□□ -1.17
USB1Q9BQ65 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
USB1Q9BQ65 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
USB1Q9BQ65 CASC19-260ENST00000641828 2001 ntBASIC7.71□□□□□ -1.17
USB1Q9BQ65 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USB1Q9BQ65 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USB1Q9BQ65 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
USB1Q9BQ65 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.71□□□□□ -1.17
USB1Q9BQ65 LINC01719-204ENST00000611275 2054 ntTSL 5 BASIC7.71□□□□□ -1.17
USB1Q9BQ65 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC025574.1-201ENST00000554784 1653 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AL592429.1-201ENST00000403909 1473 ntBASIC7.71□□□□□ -1.18
USB1Q9BQ65 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
USB1Q9BQ65 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USB1Q9BQ65 OR11H4-201ENST00000315409 1082 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms