Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RTL4Q6ZR62 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTL4Q6ZR62 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AL359091.1-201ENST00000449048 1734 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC004386.1-201ENST00000393214 761 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 MIR1282-201ENST00000408865 101 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 RPL35AP31-201ENST00000418340 337 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC023141.3-201ENST00000436698 278 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 PPIAP27-201ENST00000453800 265 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AL445687.2-201ENST00000458156 728 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC023194.2-201ENST00000465398 406 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 GOLGA5P1-201ENST00000507317 980 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 RNA5SP434-201ENST00000516647 121 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 IGKV3D-25-201ENST00000519599 235 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC008429.4-201ENST00000521201 182 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC021269.1-201ENST00000526860 705 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 NPM1P5-201ENST00000557228 838 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 CYCSP38-201ENST00000559840 322 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 AC093388.1-201ENST00000609166 430 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 MIR1910-201ENST00000636955 80 ntBASIC5.66□□□□□ -1.5
RTL4Q6ZR62 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTL4Q6ZR62 ZNF101P1-201ENST00000435701 1720 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 MTCO1P7-201ENST00000419523 1542 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 RN7SKP275-201ENST00000364626 301 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 RPL6P21-201ENST00000418672 846 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 RPS10P18-201ENST00000442662 495 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 HMGN1P2-201ENST00000445197 310 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 LDHAP1-201ENST00000509421 992 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AP003396.4-201ENST00000527574 265 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 OR6M2P-201ENST00000529831 871 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC090888.3-201ENST00000558917 509 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC005726.4-201ENST00000582858 458 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC027334.1-201ENST00000603257 310 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.65□□□□□ -1.5
RTL4Q6ZR62 OR7A1P-202ENST00000641542 1158 ntBASIC5.65□□□□□ -1.5
RTL4Q6ZR62 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
RTL4Q6ZR62 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
RTL4Q6ZR62 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.65□□□□□ -1.51
RTL4Q6ZR62 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.65□□□□□ -1.51
RTL4Q6ZR62 AC093671.1-201ENST00000624981 2929 ntBASIC5.65□□□□□ -1.51
RTL4Q6ZR62 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RTL4Q6ZR62 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RTL4Q6ZR62 HDAC1P2-201ENST00000453661 1398 ntBASIC5.65□□□□□ -1.51
RTL4Q6ZR62 AL354854.1-201ENST00000455940 1363 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms