Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PTPN20Q4JDL3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 SUGT1P2-201ENST00000379452 992 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 CXADRP1-201ENST00000398098 1095 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 VN1R12P-201ENST00000403778 876 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 RN7SKP240-201ENST00000410583 375 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 RN7SKP29-201ENST00000410957 272 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 RNU2-18P-201ENST00000411224 162 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AC066692.1-201ENST00000421721 457 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 BX323845.3-201ENST00000428215 527 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AK3P5-201ENST00000432033 519 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 MRPS21P3-201ENST00000436696 262 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 PCBP2P1-201ENST00000437262 977 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 TUBB4BP6-201ENST00000437576 479 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 KRT8P51-201ENST00000438938 274 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AC015983.1-201ENST00000441577 373 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AC023141.8-201ENST00000442554 208 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AL359839.1-201ENST00000451975 1160 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AL122020.1-201ENST00000472287 459 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AC079080.1-201ENST00000479841 822 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 RN7SL57P-201ENST00000493687 290 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 PCNAP4-201ENST00000532690 730 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AC126615.2-201ENST00000553003 515 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 CXADRP3-202ENST00000617265 1100 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 AC007159.1-201ENST00000566529 4706 ntBASIC6.16□□□□□ -1.42
PTPN20Q4JDL3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 GAPDHP48-201ENST00000436626 961 ntBASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 AC114781.3-201ENST00000512083 142 ntBASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 SNORA81.2-201ENST00000516868 170 ntBASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 TRIM77BP-201ENST00000524985 1119 ntBASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 TOMM20P1-201ENST00000534518 427 ntBASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 AL121594.2-201ENST00000541658 472 ntBASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 RPL12P48-201ENST00000605620 304 ntBASIC6.15□□□□□ -1.42
PTPN20Q4JDL3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.15□□□□□ -1.43
PTPN20Q4JDL3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN20Q4JDL3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN20Q4JDL3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.15□□□□□ -1.43
PTPN20Q4JDL3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN20Q4JDL3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN20Q4JDL3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.15□□□□□ -1.43
PTPN20Q4JDL3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
PTPN20Q4JDL3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AP004607.3-201ENST00000530354 3915 ntBASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 MRPL53P1-201ENST00000414323 319 ntBASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 DEFA9P-201ENST00000433042 285 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms