Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CLDN18P56856 AC016583.1-201ENST00000624221 2431 ntBASIC5.4□□□□□ -1.55
CLDN18P56856 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CLDN18P56856 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.4□□□□□ -1.55
CLDN18P56856 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CLDN18P56856 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.4□□□□□ -1.55
CLDN18P56856 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN18P56856 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.4□□□□□ -1.55
CLDN18P56856 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN18P56856 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 TMSB4XP2-201ENST00000335179 210 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 AC023490.2-201ENST00000359859 470 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 SNRPEP6-201ENST00000407465 277 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN18P56856 SLC20A1P1-201ENST00000413906 956 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 HMGA1P8-201ENST00000414130 321 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN18P56856 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN18P56856 IPPKP1-201ENST00000422501 768 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 BMS1P10-201ENST00000443754 1120 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 ACA64.1-201ENST00000459171 127 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 SNRPCP3-201ENST00000474888 476 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN18P56856 RNA5SP271-201ENST00000516700 88 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN18P56856 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CLDN18P56856 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.39□□□□□ -1.55
CLDN18P56856 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN18P56856 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 MIR4776-2-201ENST00000580204 80 ntBASIC5.39□□□□□ -1.55
CLDN18P56856 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN18P56856 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN18P56856 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CLDN18P56856 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CLDN18P56856 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CLDN18P56856 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN18P56856 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CLDN18P56856 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CLDN18P56856 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN18P56856 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN18P56856 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CLDN18P56856 RNU1-150P-201ENST00000362491 162 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 RN7SKP166-201ENST00000410812 305 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 RPS3P2-201ENST00000421346 701 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN18P56856 KIF4CP-201ENST00000422742 1279 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN18P56856 RPS29P14-201ENST00000431518 171 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 TUBB4BP6-201ENST00000437576 479 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN18P56856 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN18P56856 RNU7-157P-201ENST00000459600 66 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 AC104164.1-201ENST00000460282 590 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN18P56856 RPL23AP40-201ENST00000487630 390 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN18P56856 AC114781.3-201ENST00000512083 142 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN18P56856 CYP4F27P-201ENST00000514557 494 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN18P56856 WBP1LP3-201ENST00000523033 208 ntBASIC5.38□□□□□ -1.55
CLDN18P56856 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.38□□□□□ -1.55
CLDN18P56856 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN18P56856 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN18P56856 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN18P56856 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms