Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RPSAP75-201ENST00000605848 301 ntBASIC6.53□□□□□ -1.36
COPAP53621 AC025262.3-201ENST00000623666 360 ntBASIC6.53□□□□□ -1.36
COPAP53621 AC005332.9-201ENST00000620266 2921 ntBASIC6.53□□□□□ -1.36
COPAP53621 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.53□□□□□ -1.36
COPAP53621 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 AC119674.1-213ENST00000641177 1386 ntBASIC6.53□□□□□ -1.36
COPAP53621 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.53□□□□□ -1.36
COPAP53621 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 AL353743.3-201ENST00000442109 1468 ntBASIC6.53□□□□□ -1.36
COPAP53621 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COPAP53621 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.52□□□□□ -1.37
COPAP53621 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COPAP53621 DDX6P1-205ENST00000441966 1436 ntBASIC6.52□□□□□ -1.37
COPAP53621 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COPAP53621 AC007342.5-201ENST00000571340 2142 ntBASIC6.52□□□□□ -1.37
COPAP53621 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COPAP53621 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.52□□□□□ -1.37
COPAP53621 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COPAP53621 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.52□□□□□ -1.37
COPAP53621 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COPAP53621 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COPAP53621 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.52□□□□□ -1.37
COPAP53621 AL139805.1-201ENST00000407837 289 ntBASIC6.52□□□□□ -1.37
COPAP53621 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.52□□□□□ -1.37
COPAP53621 TRIM60P17-201ENST00000415181 719 ntBASIC6.52□□□□□ -1.37
COPAP53621 RAB9AP4-201ENST00000415230 609 ntBASIC6.52□□□□□ -1.37
COPAP53621 RPL23AP85-201ENST00000421838 433 ntBASIC6.52□□□□□ -1.37
COPAP53621 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.52□□□□□ -1.37
COPAP53621 AL354707.3-201ENST00000427308 331 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC069154.1-201ENST00000432914 542 ntBASIC6.52□□□□□ -1.37
COPAP53621 RAB9AP5-201ENST00000437794 597 ntBASIC6.52□□□□□ -1.37
COPAP53621 EMC3-AS1-205ENST00000438698 534 ntBASIC6.52□□□□□ -1.37
COPAP53621 CXCR2P1-202ENST00000443392 1074 ntBASIC6.52□□□□□ -1.37
COPAP53621 RAB9AP2-201ENST00000443911 597 ntBASIC6.52□□□□□ -1.37
COPAP53621 MTND2P30-201ENST00000456663 382 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.52□□□□□ -1.37
COPAP53621 AC092824.1-201ENST00000483524 576 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC091544.1-201ENST00000484702 348 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC022415.1-202ENST00000486612 523 ntBASIC6.52□□□□□ -1.37
COPAP53621 CAB39P1-201ENST00000502277 460 ntBASIC6.52□□□□□ -1.37
COPAP53621 PCNAP1-201ENST00000505363 709 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC106806.2-201ENST00000509365 500 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC108103.1-201ENST00000511286 446 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.52□□□□□ -1.37
COPAP53621 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.52□□□□□ -1.37
COPAP53621 RNA5SP206-201ENST00000516703 121 ntBASIC6.52□□□□□ -1.37
COPAP53621 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.52□□□□□ -1.37
COPAP53621 AP005639.1-201ENST00000526939 192 ntBASIC6.52□□□□□ -1.37
COPAP53621 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.52□□□□□ -1.37
COPAP53621 NPIPB14P-203ENST00000532298 987 ntBASIC6.52□□□□□ -1.37
COPAP53621 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.52□□□□□ -1.37
COPAP53621 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.52□□□□□ -1.37
COPAP53621 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.52□□□□□ -1.37
COPAP53621 AC005726.4-201ENST00000582858 458 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.52□□□□□ -1.37
COPAP53621 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.52□□□□□ -1.37
COPAP53621 AL359742.1-201ENST00000622497 540 ntBASIC6.52□□□□□ -1.37
COPAP53621 AC073488.6-201ENST00000632293 754 ntBASIC6.52□□□□□ -1.37
COPAP53621 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COPAP53621 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COPAP53621 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.52□□□□□ -1.37
COPAP53621 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.52□□□□□ -1.37
COPAP53621 CDC27P2-201ENST00000425026 1922 ntBASIC6.52□□□□□ -1.37
COPAP53621 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COPAP53621 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.52□□□□□ -1.37
COPAP53621 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COPAP53621 IMMTP1-201ENST00000435590 2219 ntBASIC6.52□□□□□ -1.37
COPAP53621 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.51□□□□□ -1.37
COPAP53621 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 QRSL1P1-201ENST00000400977 1540 ntBASIC6.51□□□□□ -1.37
COPAP53621 MTCO1P7-201ENST00000419523 1542 ntBASIC6.51□□□□□ -1.37
COPAP53621 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COPAP53621 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 SNORD8-201ENST00000363915 110 ntBASIC6.51□□□□□ -1.37
COPAP53621 AL451046.1-201ENST00000406097 534 ntBASIC6.51□□□□□ -1.37
COPAP53621 RN7SKP281-201ENST00000410472 352 ntBASIC6.51□□□□□ -1.37
COPAP53621 RN7SKP108-201ENST00000411367 328 ntBASIC6.51□□□□□ -1.37
COPAP53621 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.51□□□□□ -1.37
COPAP53621 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.51□□□□□ -1.37
COPAP53621 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 SCAND3P1-201ENST00000439854 1060 ntBASIC6.51□□□□□ -1.37
COPAP53621 RPL31P20-201ENST00000449593 360 ntBASIC6.51□□□□□ -1.37
COPAP53621 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.51□□□□□ -1.37
COPAP53621 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
COPAP53621 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.51□□□□□ -1.37
COPAP53621 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.51□□□□□ -1.37
COPAP53621 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms