Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL096800.1-201ENST00000405326 893 ntBASIC7.39□□□□□ -1.23
MRE11P49959 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.39□□□□□ -1.23
MRE11P49959 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.39□□□□□ -1.23
MRE11P49959 AC015977.1-201ENST00000418887 292 ntBASIC7.39□□□□□ -1.23
MRE11P49959 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.39□□□□□ -1.23
MRE11P49959 AC009506.2-201ENST00000420635 840 ntBASIC7.39□□□□□ -1.23
MRE11P49959 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
MRE11P49959 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.39□□□□□ -1.23
MRE11P49959 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.39□□□□□ -1.23
MRE11P49959 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7.39□□□□□ -1.23
MRE11P49959 MTCYBP11-201ENST00000447254 1109 ntBASIC7.39□□□□□ -1.23
MRE11P49959 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC7.39□□□□□ -1.23
MRE11P49959 RN7SKP11-201ENST00000517018 287 ntBASIC7.39□□□□□ -1.23
MRE11P49959 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.39□□□□□ -1.23
MRE11P49959 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.39□□□□□ -1.23
MRE11P49959 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.39□□□□□ -1.23
MRE11P49959 AL845552.1-201ENST00000556820 323 ntBASIC7.39□□□□□ -1.23
MRE11P49959 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
MRE11P49959 NPM1P42-201ENST00000560329 862 ntBASIC7.39□□□□□ -1.23
MRE11P49959 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 AC006116.5-201ENST00000591936 559 ntBASIC7.39□□□□□ -1.23
MRE11P49959 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.39□□□□□ -1.23
MRE11P49959 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.39□□□□□ -1.23
MRE11P49959 PPATP2-201ENST00000605635 508 ntBASIC7.39□□□□□ -1.23
MRE11P49959 AL136097.3-201ENST00000611097 505 ntBASIC7.39□□□□□ -1.23
MRE11P49959 AC005899.7-201ENST00000618199 588 ntBASIC7.39□□□□□ -1.23
MRE11P49959 AL162233.1-201ENST00000620014 944 ntBASIC7.39□□□□□ -1.23
MRE11P49959 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.39□□□□□ -1.23
MRE11P49959 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
MRE11P49959 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.38□□□□□ -1.23
MRE11P49959 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 RN7SKP191-201ENST00000364713 306 ntBASIC7.38□□□□□ -1.23
MRE11P49959 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 RNU6-891P-201ENST00000384280 111 ntBASIC7.38□□□□□ -1.23
MRE11P49959 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
MRE11P49959 AC026310.1-201ENST00000396004 378 ntBASIC7.38□□□□□ -1.23
MRE11P49959 RN7SKP129-201ENST00000410288 299 ntBASIC7.38□□□□□ -1.23
MRE11P49959 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.38□□□□□ -1.23
MRE11P49959 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC7.38□□□□□ -1.23
MRE11P49959 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC7.38□□□□□ -1.23
MRE11P49959 NME1P1-201ENST00000420914 382 ntBASIC7.38□□□□□ -1.23
MRE11P49959 AC016027.5-201ENST00000427227 210 ntBASIC7.38□□□□□ -1.23
MRE11P49959 NPM1P25-201ENST00000429734 854 ntBASIC7.38□□□□□ -1.23
MRE11P49959 AC069154.1-201ENST00000432914 542 ntBASIC7.38□□□□□ -1.23
MRE11P49959 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.38□□□□□ -1.23
MRE11P49959 LDHBP2-201ENST00000456969 1005 ntBASIC7.38□□□□□ -1.23
MRE11P49959 ATP5G1P3-201ENST00000463301 410 ntBASIC7.38□□□□□ -1.23
MRE11P49959 AP001960.1-201ENST00000506494 658 ntBASIC7.38□□□□□ -1.23
MRE11P49959 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.38□□□□□ -1.23
MRE11P49959 AC022826.1-201ENST00000519383 805 ntBASIC7.38□□□□□ -1.23
MRE11P49959 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC7.38□□□□□ -1.23
MRE11P49959 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.38□□□□□ -1.23
MRE11P49959 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC7.38□□□□□ -1.23
MRE11P49959 EIF4A3P1-201ENST00000578499 647 ntBASIC7.38□□□□□ -1.23
MRE11P49959 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 RPL7AP69-201ENST00000595306 806 ntBASIC7.38□□□□□ -1.23
MRE11P49959 RPS4XP21-201ENST00000603814 750 ntBASIC7.38□□□□□ -1.23
MRE11P49959 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 AP003400.2-201ENST00000624036 666 ntBASIC7.38□□□□□ -1.23
MRE11P49959 AC114546.4-201ENST00000624413 369 ntBASIC7.38□□□□□ -1.23
MRE11P49959 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 AL359263.1-201ENST00000441188 2796 ntBASIC7.38□□□□□ -1.23
MRE11P49959 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.38□□□□□ -1.23
MRE11P49959 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.38□□□□□ -1.23
MRE11P49959 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
MRE11P49959 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MRE11P49959 AC139426.3-201ENST00000605648 2059 ntBASIC7.37□□□□□ -1.23
MRE11P49959 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
MRE11P49959 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.37□□□□□ -1.23
MRE11P49959 NCOA4P2-201ENST00000340589 1813 ntBASIC7.37□□□□□ -1.23
MRE11P49959 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
MRE11P49959 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 UBE2V1P15-201ENST00000407776 448 ntBASIC7.37□□□□□ -1.23
MRE11P49959 RN7SKP91-201ENST00000410852 288 ntBASIC7.37□□□□□ -1.23
MRE11P49959 CHEK2P5-201ENST00000423877 246 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms