Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKHD1P08F94 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PKHD1P08F94 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKHD1P08F94 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC3.54□□□□□ -1.84
PKHD1P08F94 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC3.54□□□□□ -1.84
PKHD1P08F94 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 AC006213.6-201ENST00000623722 4179 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 RNU1-146P-201ENST00000364015 165 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 AC093414.1-201ENST00000434712 514 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AC091180.1-201ENST00000462104 372 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.53□□□□□ -1.84
PKHD1P08F94 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 BNIP3P22-201ENST00000593399 556 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC3.53□□□□□ -1.84
PKHD1P08F94 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.84
PKHD1P08F94 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.53□□□□□ -1.84
PKHD1P08F94 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PKHD1P08F94 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 NUDT19P3-201ENST00000404698 555 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 ELOCP19-201ENST00000411919 318 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 AC007559.1-201ENST00000428736 355 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 HPRT1P1-201ENST00000509498 657 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 AL109766.1-201ENST00000555080 552 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.53□□□□□ -1.84
PKHD1P08F94 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AC103792.1-201ENST00000603591 919 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC3.53□□□□□ -1.84
PKHD1P08F94 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AC130304.1-201ENST00000622942 2385 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.53□□□□□ -1.84
PKHD1P08F94 RPL7AP10-201ENST00000481016 791 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 DPPA3P2-202ENST00000557188 1219 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 SS18L2P2-201ENST00000583960 235 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.53□□□□□ -1.84
PKHD1P08F94 AC137695.1-201ENST00000604126 489 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 MIR6716-201ENST00000613413 80 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 AL161637.1-201ENST00000622380 412 ntBASIC3.53□□□□□ -1.84
PKHD1P08F94 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKHD1P08F94 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC3.53□□□□□ -1.84
PKHD1P08F94 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
PKHD1P08F94 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PKHD1P08F94 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PKHD1P08F94 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PKHD1P08F94 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC3.53□□□□□ -1.85
PKHD1P08F94 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKHD1P08F94 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKHD1P08F94 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKHD1P08F94 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKHD1P08F94 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.52□□□□□ -1.85
PKHD1P08F94 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC3.52□□□□□ -1.85
PKHD1P08F94 FAM71F2-205ENST00000641605 5749 ntBASIC3.52□□□□□ -1.85
PKHD1P08F94 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKHD1P08F94 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKHD1P08F94 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PKHD1P08F94 RN7SKP95-201ENST00000362860 303 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms