Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC018558.5-201ENST00000565840 952 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC068768.2-201ENST00000602352 343 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC024255.1-201ENST00000614376 102 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC006249.1-201ENST00000621223 471 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AL137058.3-201ENST00000624531 3099 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AL161901.1-201ENST00000624954 3425 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 RNA5SP510-201ENST00000364697 99 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 SLC20A1P1-201ENST00000413906 956 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 UBE2V1P14-201ENST00000415815 558 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 RPL35AP31-201ENST00000418340 337 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 SCAND3P1-201ENST00000439854 1060 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 HLA-DPA3-207ENST00000454398 229 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 SNX18P26-201ENST00000458433 740 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC084754.1-201ENST00000463466 464 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 IGLVIV-64-201ENST00000518581 301 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC074029.2-201ENST00000551045 634 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 RPA2P1-201ENST00000556557 721 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 LINC00556-201ENST00000569603 412 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AL683813.2-201ENST00000605245 502 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AL591167.1-201ENST00000607321 456 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC074276.2-201ENST00000619891 348 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC073488.3-201ENST00000631611 778 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC024651.2-201ENST00000562480 2098 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 AC008627.1-201ENST00000517511 1704 ntBASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TBC1D3FA6NER0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AL391261.1-201ENST00000555712 1479 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AL445238.1-204ENST00000400311 463 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 LYPLA1P3-201ENST00000402650 695 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 MTND2P9-201ENST00000422293 931 ntBASIC6.18□□□□□ -1.42
TBC1D3FA6NER0 AC073464.3-201ENST00000422564 712 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms