Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RPL23AP60-201ENST00000450011 454 ntBASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC025458.1-201ENST00000506046 166 ntBASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CR383658.1-201ENST00000514609 734 ntBASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 IGKV3D-25-201ENST00000519599 235 ntBASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NPM1P42-201ENST00000560329 862 ntBASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC024884.1-201ENST00000620583 399 ntBASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL137067.2-201ENST00000621202 131 ntBASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 OR7A1P-202ENST00000641542 1158 ntBASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC140134.1-201ENST00000511830 3544 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 KYNUP3-201ENST00000574386 1341 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RNA5SP110-201ENST00000362638 115 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SUGT1P2-201ENST00000379452 992 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC066692.1-201ENST00000421721 457 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL590399.2-201ENST00000427536 309 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 GAPDHP23-201ENST00000444823 993 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL162739.1-201ENST00000450606 307 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SNRPCP3-201ENST00000474888 476 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TPM3P3-201ENST00000521343 354 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC021269.1-201ENST00000526860 705 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AP001858.2-201ENST00000536213 601 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RPA2P1-201ENST00000556557 721 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC093388.1-201ENST00000609166 430 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PCA3_2.1-201ENST00000612507 409 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC026124.2-201ENST00000621847 656 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SNX18P12-201ENST00000624821 759 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL138820.1-201ENST00000617901 5305 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NLRP3P1-201ENST00000622303 1785 ntBASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms