Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX49Q9Y6V7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
DDX49Q9Y6V7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX49Q9Y6V7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.59■■□□□ 1.37
DDX49Q9Y6V7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 AC128676.1-201ENST00000454392 318 ntBASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX49Q9Y6V7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
DDX49Q9Y6V7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
DDX49Q9Y6V7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.58■■□□□ 1.36
DDX49Q9Y6V7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX49Q9Y6V7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 UNC93B5-201ENST00000530315 699 ntBASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX49Q9Y6V7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX49Q9Y6V7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX49Q9Y6V7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
DDX49Q9Y6V7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms