Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 MIR4758-201ENST00000577688 71 ntBASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 AC092666.2-201ENST00000613287 246 ntBASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 AC116351.2-201ENST00000606540 1585 ntBASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CYP46A1Q9Y6A2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 AC005332.7-201ENST00000614046 2005 ntBASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.37■■□□□ 1.33
CYP46A1Q9Y6A2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CYP46A1Q9Y6A2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CYP46A1Q9Y6A2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 AC097658.1-201ENST00000475555 843 ntBASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
CYP46A1Q9Y6A2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 AC006557.6-201ENST00000623071 864 ntBASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 MYC-209ENST00000641252 345 ntBASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.33■■□□□ 1.33
CYP46A1Q9Y6A2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CYP46A1Q9Y6A2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.33■■□□□ 1.32
CYP46A1Q9Y6A2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms