Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 AC091874.3-201ENST00000512672 1195 ntBASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 AC125437.2-201ENST00000625180 2167 ntBASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA11Q9Y5H2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 AL390719.1-204ENST00000412397 1219 ntBASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA11Q9Y5H2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA11Q9Y5H2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA11Q9Y5H2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHGA11Q9Y5H2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDHGA11Q9Y5H2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA11Q9Y5H2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 AC073210.2-201ENST00000430369 194 ntBASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA11Q9Y5H2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA11Q9Y5H2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA11Q9Y5H2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms