Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 AC099778.1-201ENST00000568593 1911 ntBASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHB11Q9Y5F2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 PCDHAC2-203ENST00000615316 3011 ntBASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 AL023875.1-201ENST00000640777 796 ntBASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB11Q9Y5F2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 BX088651.1-201ENST00000540551 451 ntBASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 AC006557.6-201ENST00000623071 864 ntBASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB11Q9Y5F2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 MTDHP1-201ENST00000605323 784 ntBASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 AC110285.5-201ENST00000611501 352 ntBASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 KRT16P6-202ENST00000425692 1426 ntBASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 AC112907.3-201ENST00000577781 2400 ntBASIC19.3■□□□□ 0.68
PCDHB11Q9Y5F2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 AC133681.1-201ENST00000465482 601 ntBASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 MIR4785-201ENST00000585005 73 ntBASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 AC124016.1-201ENST00000609552 612 ntBASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB11Q9Y5F2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms