Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 AL031963.3-201ENST00000606441 850 ntBASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 AC019069.1-201ENST00000610008 1333 ntBASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EXOSC1Q9Y3B2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 CROCCP3-202ENST00000420820 1947 ntBASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
EXOSC1Q9Y3B2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 AL031432.3-201ENST00000607698 485 ntBASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 LINC02228-203ENST00000641970 1355 ntBASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 AC020763.4-201ENST00000623414 4170 ntBASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 KRT8P20-201ENST00000423953 1409 ntBASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EXOSC1Q9Y3B2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms