Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 KSR1P1-201ENST00000446298 240 ntBASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 AC073130.3-201ENST00000624389 2278 ntBASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX2IPQ9Y2D8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSX2IPQ9Y2D8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 RBM17P1-201ENST00000453646 1190 ntBASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSX2IPQ9Y2D8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 RCN1P1-201ENST00000400413 996 ntBASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 NIFKP9-201ENST00000419265 221 ntBASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 REXO1L10P-201ENST00000615707 1290 ntBASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SSX2IPQ9Y2D8 AC092667.1-201ENST00000434301 2586 ntBASIC21.14■□□□□ 0.98
SSX2IPQ9Y2D8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSX2IPQ9Y2D8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSX2IPQ9Y2D8 KRT16P1-201ENST00000399124 1418 ntBASIC21.14■□□□□ 0.98
SSX2IPQ9Y2D8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.14■□□□□ 0.98
SSX2IPQ9Y2D8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms