Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 AC100791.3-201ENST00000617619 330 ntBASIC17.54■□□□□ 0.4
COPS3Q9UNS2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 AC068338.2-201ENST00000563278 1430 ntBASIC17.54■□□□□ 0.4
COPS3Q9UNS2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS3Q9UNS2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 KRT18P11-201ENST00000435214 1283 ntBASIC17.53■□□□□ 0.4
COPS3Q9UNS2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 AC137761.2-201ENST00000561729 223 ntBASIC17.53■□□□□ 0.4
COPS3Q9UNS2 AC145350.3-201ENST00000569033 163 ntBASIC17.53■□□□□ 0.4
COPS3Q9UNS2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS3Q9UNS2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 AL032819.2-201ENST00000624543 2162 ntBASIC17.52■□□□□ 0.4
COPS3Q9UNS2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 DUX4L16-201ENST00000555130 1264 ntBASIC17.52■□□□□ 0.4
COPS3Q9UNS2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 AC087623.3-201ENST00000607047 1098 ntBASIC17.52■□□□□ 0.4
COPS3Q9UNS2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS3Q9UNS2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 AP001271.2-201ENST00000624018 1556 ntBASIC17.52■□□□□ 0.39
COPS3Q9UNS2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.52■□□□□ 0.39
COPS3Q9UNS2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 KRT18P68-201ENST00000392293 1000 ntBASIC17.51■□□□□ 0.39
COPS3Q9UNS2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 AC011767.1-201ENST00000617410 1153 ntBASIC17.51■□□□□ 0.39
COPS3Q9UNS2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS3Q9UNS2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms