Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC3Q9UN70 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDHGC3Q9UN70 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDHGC3Q9UN70 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGC3Q9UN70 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
PCDHGC3Q9UN70 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGC3Q9UN70 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGC3Q9UN70 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGC3Q9UN70 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.83■□□□□ 0.92
PCDHGC3Q9UN70 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDHGC3Q9UN70 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 AP006587.1-201ENST00000534129 1502 ntBASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC3Q9UN70 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 KRT17P3-201ENST00000420566 1262 ntBASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 YBX1P10-201ENST00000444752 975 ntBASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGC3Q9UN70 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 ESRRAP1-201ENST00000400596 1257 ntBASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 CD99P1-205ENST00000527459 561 ntBASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms