Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 AC099398.1-201ENST00000567919 2776 ntBASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 AC106739.1-201ENST00000617035 715 ntBASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBQLN2Q9UHD9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 MIR4767-201ENST00000582827 78 ntBASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 PKD1P1-201ENST00000458669 6805 ntBASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN2Q9UHD9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN2Q9UHD9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms