Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EBF1Q9UH73 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 PTBP1P-201ENST00000554374 1601 ntBASIC20.09■□□□□ 0.81
EBF1Q9UH73 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EBF1Q9UH73 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EBF1Q9UH73 KRT18P22-201ENST00000402024 1347 ntBASIC20.09■□□□□ 0.81
EBF1Q9UH73 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
EBF1Q9UH73 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EBF1Q9UH73 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 NAPSB-206ENST00000562112 1266 ntBASIC20.09■□□□□ 0.81
EBF1Q9UH73 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EBF1Q9UH73 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
EBF1Q9UH73 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
EBF1Q9UH73 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.08■□□□□ 0.81
EBF1Q9UH73 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EBF1Q9UH73 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EBF1Q9UH73 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
EBF1Q9UH73 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
EBF1Q9UH73 HLA-G-202ENST00000376815 851 ntBASIC20.08■□□□□ 0.81
EBF1Q9UH73 HLA-G-203ENST00000376818 1127 ntBASIC20.08■□□□□ 0.81
EBF1Q9UH73 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.08■□□□□ 0.81
EBF1Q9UH73 NIFKP9-201ENST00000419265 221 ntBASIC20.08■□□□□ 0.81
EBF1Q9UH73 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.08■□□□□ 0.81
EBF1Q9UH73 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.08■□□□□ 0.81
EBF1Q9UH73 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
EBF1Q9UH73 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
EBF1Q9UH73 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
EBF1Q9UH73 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
EBF1Q9UH73 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EBF1Q9UH73 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EBF1Q9UH73 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EBF1Q9UH73 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
EBF1Q9UH73 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.06■□□□□ 0.8
EBF1Q9UH73 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EBF1Q9UH73 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.06■□□□□ 0.8
EBF1Q9UH73 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.06■□□□□ 0.8
EBF1Q9UH73 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.06■□□□□ 0.8
EBF1Q9UH73 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EBF1Q9UH73 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.05■□□□□ 0.8
EBF1Q9UH73 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.05■□□□□ 0.8
EBF1Q9UH73 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 KRT16P1-201ENST00000399124 1418 ntBASIC20.05■□□□□ 0.8
EBF1Q9UH73 AC073508.3-201ENST00000619697 1419 ntBASIC20.05■□□□□ 0.8
EBF1Q9UH73 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.05■□□□□ 0.8
EBF1Q9UH73 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.05■□□□□ 0.8
EBF1Q9UH73 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.05■□□□□ 0.8
EBF1Q9UH73 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.05■□□□□ 0.8
EBF1Q9UH73 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.05■□□□□ 0.8
EBF1Q9UH73 AC010947.1-201ENST00000623454 693 ntBASIC20.05■□□□□ 0.8
EBF1Q9UH73 CR392000.1-201ENST00000624770 1228 ntBASIC20.05■□□□□ 0.8
EBF1Q9UH73 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms