Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUX4Q9UBX2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DUX4Q9UBX2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DUX4Q9UBX2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 TNXA-203ENST00000507684 2038 ntBASIC17.27■□□□□ 0.36
DUX4Q9UBX2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 AC243732.1-201ENST00000612648 864 ntBASIC17.27■□□□□ 0.36
DUX4Q9UBX2 AC013268.1-206ENST00000638368 961 ntBASIC17.27■□□□□ 0.36
DUX4Q9UBX2 AC112229.1-201ENST00000639295 961 ntBASIC17.27■□□□□ 0.36
DUX4Q9UBX2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.27■□□□□ 0.36
DUX4Q9UBX2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DUX4Q9UBX2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
DUX4Q9UBX2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
DUX4Q9UBX2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.27■□□□□ 0.35
DUX4Q9UBX2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
DUX4Q9UBX2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
DUX4Q9UBX2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 AC090192.1-201ENST00000517740 490 ntBASIC17.26■□□□□ 0.35
DUX4Q9UBX2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX4Q9UBX2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 AC068338.2-201ENST00000563278 1430 ntBASIC17.25■□□□□ 0.35
DUX4Q9UBX2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 MIR663A-201ENST00000385250 93 ntBASIC17.25■□□□□ 0.35
DUX4Q9UBX2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 AC007322.1-201ENST00000426983 750 ntBASIC17.25■□□□□ 0.35
DUX4Q9UBX2 CROCCP5-201ENST00000436658 830 ntBASIC17.25■□□□□ 0.35
DUX4Q9UBX2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 AC016405.3-201ENST00000607710 860 ntBASIC17.25■□□□□ 0.35
DUX4Q9UBX2 AL050303.2-201ENST00000619798 666 ntBASIC17.25■□□□□ 0.35
DUX4Q9UBX2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX4Q9UBX2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.24■□□□□ 0.35
DUX4Q9UBX2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
DUX4Q9UBX2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DUX4Q9UBX2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DUX4Q9UBX2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DUX4Q9UBX2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DUX4Q9UBX2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX4Q9UBX2 PLK5-205ENST00000642079 1969 ntBASIC17.24■□□□□ 0.35
DUX4Q9UBX2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms