Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
BRD9Q9H8M2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.38■□□□□ 0.85
BRD9Q9H8M2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRD9Q9H8M2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.38■□□□□ 0.85
BRD9Q9H8M2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRD9Q9H8M2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.38■□□□□ 0.85
BRD9Q9H8M2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.38■□□□□ 0.85
BRD9Q9H8M2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
BRD9Q9H8M2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.37■□□□□ 0.85
BRD9Q9H8M2 ATP5G1P1-201ENST00000448724 379 ntBASIC20.37■□□□□ 0.85
BRD9Q9H8M2 DUX4L26-201ENST00000489078 1255 ntBASIC20.37■□□□□ 0.85
BRD9Q9H8M2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 AC026271.3-201ENST00000571884 352 ntBASIC20.37■□□□□ 0.85
BRD9Q9H8M2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 AL445675.2-201ENST00000620291 557 ntBASIC20.37■□□□□ 0.85
BRD9Q9H8M2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRD9Q9H8M2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRD9Q9H8M2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 AC104076.2-201ENST00000448912 469 ntBASIC20.35■□□□□ 0.85
BRD9Q9H8M2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 NTF6B-201ENST00000591913 560 ntBASIC20.35■□□□□ 0.85
BRD9Q9H8M2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRD9Q9H8M2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 MESTP1-201ENST00000404287 994 ntBASIC20.34■□□□□ 0.85
BRD9Q9H8M2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.34■□□□□ 0.85
BRD9Q9H8M2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRD9Q9H8M2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRD9Q9H8M2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms