Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 AC083880.1-201ENST00000608266 535 ntBASIC24.87■■□□□ 1.57
CHMP4BQ9H444 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 AC006557.6-201ENST00000623071 864 ntBASIC24.87■■□□□ 1.57
CHMP4BQ9H444 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHMP4BQ9H444 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.86■■□□□ 1.57
CHMP4BQ9H444 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHMP4BQ9H444 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 AL121906.2-201ENST00000621597 723 ntBASIC24.85■■□□□ 1.57
CHMP4BQ9H444 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHMP4BQ9H444 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 RPS2P52-201ENST00000469610 820 ntBASIC24.84■■□□□ 1.57
CHMP4BQ9H444 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CHMP4BQ9H444 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 AL158211.5-201ENST00000623583 2518 ntBASIC24.83■■□□□ 1.57
CHMP4BQ9H444 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.83■■□□□ 1.57
CHMP4BQ9H444 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHMP4BQ9H444 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms