Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC004951.3-201ENST00000418645 1148 ntBASIC21.61■■□□□ 1.05
HIPK3Q9H422 TSPY5P-201ENST00000426936 936 ntBASIC21.61■■□□□ 1.05
HIPK3Q9H422 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK3Q9H422 AC092647.4-201ENST00000457211 535 ntBASIC21.61■■□□□ 1.05
HIPK3Q9H422 AC008040.2-201ENST00000461049 708 ntBASIC21.61■■□□□ 1.05
HIPK3Q9H422 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.61■■□□□ 1.05
HIPK3Q9H422 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK3Q9H422 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK3Q9H422 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
HIPK3Q9H422 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.61■■□□□ 1.05
HIPK3Q9H422 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK3Q9H422 KRT16P6-202ENST00000425692 1426 ntBASIC21.61■■□□□ 1.05
HIPK3Q9H422 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK3Q9H422 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.61■■□□□ 1.05
HIPK3Q9H422 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK3Q9H422 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK3Q9H422 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK3Q9H422 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK3Q9H422 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK3Q9H422 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 AP000550.4-202ENST00000639755 178 ntBASIC21.6■■□□□ 1.05
HIPK3Q9H422 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK3Q9H422 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK3Q9H422 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK3Q9H422 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK3Q9H422 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
HIPK3Q9H422 DPP3P2-201ENST00000416030 1696 ntBASIC21.6■■□□□ 1.05
HIPK3Q9H422 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.59■■□□□ 1.05
HIPK3Q9H422 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HIPK3Q9H422 SLC25A1P2-201ENST00000430693 912 ntBASIC21.59■■□□□ 1.05
HIPK3Q9H422 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HIPK3Q9H422 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.59■■□□□ 1.05
HIPK3Q9H422 COX11P1-201ENST00000489116 835 ntBASIC21.59■■□□□ 1.05
HIPK3Q9H422 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.59■■□□□ 1.05
HIPK3Q9H422 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.59■■□□□ 1.05
HIPK3Q9H422 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.59■■□□□ 1.05
HIPK3Q9H422 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.59■■□□□ 1.05
HIPK3Q9H422 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 AC096733.2-201ENST00000609937 1394 ntBASIC21.59■■□□□ 1.05
HIPK3Q9H422 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.59■■□□□ 1.05
HIPK3Q9H422 FBXW4P1-201ENST00000426721 2239 ntBASIC21.59■■□□□ 1.05
HIPK3Q9H422 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK3Q9H422 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK3Q9H422 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
HIPK3Q9H422 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK3Q9H422 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK3Q9H422 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK3Q9H422 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK3Q9H422 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK3Q9H422 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK3Q9H422 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
HIPK3Q9H422 AC009947.2-201ENST00000444014 672 ntBASIC21.58■■□□□ 1.05
HIPK3Q9H422 FAM207BP-201ENST00000447172 505 ntBASIC21.58■■□□□ 1.05
HIPK3Q9H422 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.58■■□□□ 1.05
HIPK3Q9H422 AL121894.2-201ENST00000602977 491 ntBASIC21.58■■□□□ 1.05
HIPK3Q9H422 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
HIPK3Q9H422 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HIPK3Q9H422 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.58■■□□□ 1.04
HIPK3Q9H422 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
HIPK3Q9H422 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HIPK3Q9H422 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 KRT126P-201ENST00000549467 1181 ntBASIC21.57■■□□□ 1.04
HIPK3Q9H422 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 HLA-A-209ENST00000638375 975 ntBASIC21.57■■□□□ 1.04
HIPK3Q9H422 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK3Q9H422 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.57■■□□□ 1.04
HIPK3Q9H422 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms