Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 CCDC190-201ENST00000367910 1498 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 AC120338.1-201ENST00000625074 1541 ntBASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
KRTAP4-4Q9BYR3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 RBMY2FP-201ENST00000303922 2042 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AKR1C4-202ENST00000380448 1414 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 MIR638-201ENST00000385237 100 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 FABP12P1-201ENST00000401911 322 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 RN7SKP38-201ENST00000410782 309 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 Y_RNA.619-201ENST00000410951 90 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 PCNPP4-201ENST00000414817 517 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 MTATP6P11-201ENST00000428071 670 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 DLGAP5P1-201ENST00000430307 464 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 OR6C71P-201ENST00000432580 913 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 MTND4LP10-201ENST00000435146 291 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AL645638.1-201ENST00000440519 361 ntBASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP4-4Q9BYR3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms