Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC28.43■■■□□ 2.14
SCAF11Q99590 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 HIST1H2APS4-201ENST00000362070 348 ntBASIC28.43■■■□□ 2.14
SCAF11Q99590 TSPY5P-201ENST00000426936 936 ntBASIC28.43■■■□□ 2.14
SCAF11Q99590 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC28.43■■■□□ 2.14
SCAF11Q99590 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC28.43■■■□□ 2.14
SCAF11Q99590 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SCAF11Q99590 KRT8P20-201ENST00000423953 1409 ntBASIC28.42■■■□□ 2.14
SCAF11Q99590 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
SCAF11Q99590 IER3-202ENST00000376377 1350 ntBASIC28.42■■■□□ 2.14
SCAF11Q99590 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC28.42■■■□□ 2.14
SCAF11Q99590 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC28.42■■■□□ 2.14
SCAF11Q99590 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC28.42■■■□□ 2.14
SCAF11Q99590 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SCAF11Q99590 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SCAF11Q99590 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC28.42■■■□□ 2.14
SCAF11Q99590 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SCAF11Q99590 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SCAF11Q99590 AC096733.2-201ENST00000609937 1394 ntBASIC28.41■■■□□ 2.14
SCAF11Q99590 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC28.41■■■□□ 2.14
SCAF11Q99590 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF11Q99590 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF11Q99590 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC28.41■■■□□ 2.14
SCAF11Q99590 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF11Q99590 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF11Q99590 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF11Q99590 SLC25A1P4-201ENST00000567977 778 ntBASIC28.41■■■□□ 2.14
SCAF11Q99590 AP000692.2-201ENST00000608391 879 ntBASIC28.41■■■□□ 2.14
SCAF11Q99590 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
SCAF11Q99590 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SCAF11Q99590 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
SCAF11Q99590 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF11Q99590 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC28.4■■■□□ 2.14
SCAF11Q99590 COX11P1-201ENST00000489116 835 ntBASIC28.4■■■□□ 2.14
SCAF11Q99590 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC28.4■■■□□ 2.14
SCAF11Q99590 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC28.4■■■□□ 2.14
SCAF11Q99590 GPX4-207ENST00000589115 812 ntTSL 2 BASIC28.4■■■□□ 2.14
SCAF11Q99590 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC28.4■■■□□ 2.14
SCAF11Q99590 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF11Q99590 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC28.4■■■□□ 2.14
SCAF11Q99590 AP006587.1-201ENST00000534129 1502 ntBASIC28.4■■■□□ 2.14
SCAF11Q99590 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF11Q99590 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF11Q99590 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SCAF11Q99590 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC28.4■■■□□ 2.14
SCAF11Q99590 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
SCAF11Q99590 AC093458.2-201ENST00000623150 629 ntBASIC28.4■■■□□ 2.14
SCAF11Q99590 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
SCAF11Q99590 RCC2P6-201ENST00000526625 1557 ntBASIC28.39■■■□□ 2.14
SCAF11Q99590 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC28.39■■■□□ 2.13
SCAF11Q99590 CD70-202ENST00000423145 881 ntTSL 2 BASIC28.39■■■□□ 2.13
SCAF11Q99590 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC28.39■■■□□ 2.13
SCAF11Q99590 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
SCAF11Q99590 YBX1P10-201ENST00000444752 975 ntBASIC28.39■■■□□ 2.13
SCAF11Q99590 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
SCAF11Q99590 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
SCAF11Q99590 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
SCAF11Q99590 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
SCAF11Q99590 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
SCAF11Q99590 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC28.38■■■□□ 2.13
SCAF11Q99590 HCG4P8-203ENST00000443049 980 ntBASIC28.38■■■□□ 2.13
SCAF11Q99590 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC28.38■■■□□ 2.13
SCAF11Q99590 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC28.38■■■□□ 2.13
SCAF11Q99590 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC28.38■■■□□ 2.13
SCAF11Q99590 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC28.38■■■□□ 2.13
SCAF11Q99590 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC28.38■■■□□ 2.13
SCAF11Q99590 AC116562.4-202ENST00000641738 218 ntBASIC28.38■■■□□ 2.13
SCAF11Q99590 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF11Q99590 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SCAF11Q99590 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC28.38■■■□□ 2.13
SCAF11Q99590 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
SCAF11Q99590 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SCAF11Q99590 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
SCAF11Q99590 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF11Q99590 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC28.37■■■□□ 2.13
SCAF11Q99590 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF11Q99590 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF11Q99590 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC28.37■■■□□ 2.13
SCAF11Q99590 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC28.37■■■□□ 2.13
SCAF11Q99590 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF11Q99590 ANKRD20A18P-201ENST00000359341 492 ntBASIC28.37■■■□□ 2.13
SCAF11Q99590 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF11Q99590 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SCAF11Q99590 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF11Q99590 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
SCAF11Q99590 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC28.37■■■□□ 2.13
SCAF11Q99590 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC28.37■■■□□ 2.13
SCAF11Q99590 CLEC4GP1-201ENST00000596555 870 ntBASIC28.37■■■□□ 2.13
SCAF11Q99590 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC28.37■■■□□ 2.13
SCAF11Q99590 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF11Q99590 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
SCAF11Q99590 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
SCAF11Q99590 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF11Q99590 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF11Q99590 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF11Q99590 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms