Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.2■□□□□ 0.66
PKP4Q99569 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.2■□□□□ 0.66
PKP4Q99569 MIR4651-201ENST00000582622 73 ntBASIC19.2■□□□□ 0.66
PKP4Q99569 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PKP4Q99569 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.2■□□□□ 0.66
PKP4Q99569 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PKP4Q99569 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PKP4Q99569 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
PKP4Q99569 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.19■□□□□ 0.66
PKP4Q99569 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.19■□□□□ 0.66
PKP4Q99569 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PKP4Q99569 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.19■□□□□ 0.66
PKP4Q99569 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PKP4Q99569 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.19■□□□□ 0.66
PKP4Q99569 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP4Q99569 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.19■□□□□ 0.66
PKP4Q99569 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PKP4Q99569 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.18■□□□□ 0.66
PKP4Q99569 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP4Q99569 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PKP4Q99569 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP4Q99569 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PKP4Q99569 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP4Q99569 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP4Q99569 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.18■□□□□ 0.66
PKP4Q99569 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP4Q99569 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.18■□□□□ 0.66
PKP4Q99569 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PKP4Q99569 AL121906.2-201ENST00000621597 723 ntBASIC19.18■□□□□ 0.66
PKP4Q99569 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PKP4Q99569 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP4Q99569 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.18■□□□□ 0.66
PKP4Q99569 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP4Q99569 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PKP4Q99569 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP4Q99569 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP4Q99569 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PKP4Q99569 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.17■□□□□ 0.66
PKP4Q99569 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.17■□□□□ 0.66
PKP4Q99569 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PKP4Q99569 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.17■□□□□ 0.66
PKP4Q99569 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.17■□□□□ 0.66
PKP4Q99569 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 AL121829.2-201ENST00000620908 328 ntBASIC19.17■□□□□ 0.66
PKP4Q99569 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
PKP4Q99569 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.17■□□□□ 0.66
PKP4Q99569 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.17■□□□□ 0.66
PKP4Q99569 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP4Q99569 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.16■□□□□ 0.66
PKP4Q99569 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.16■□□□□ 0.66
PKP4Q99569 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PKP4Q99569 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.16■□□□□ 0.66
PKP4Q99569 AC233263.1-201ENST00000578059 224 ntBASIC19.16■□□□□ 0.66
PKP4Q99569 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.16■□□□□ 0.66
PKP4Q99569 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms