Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NOTCH4Q99466 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.41■□□□□ 0.86
NOTCH4Q99466 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.41■□□□□ 0.86
NOTCH4Q99466 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NOTCH4Q99466 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.41■□□□□ 0.86
NOTCH4Q99466 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.41■□□□□ 0.86
NOTCH4Q99466 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NOTCH4Q99466 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NOTCH4Q99466 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.41■□□□□ 0.86
NOTCH4Q99466 AC007663.1-201ENST00000438948 1240 ntBASIC20.41■□□□□ 0.86
NOTCH4Q99466 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.41■□□□□ 0.86
NOTCH4Q99466 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.41■□□□□ 0.86
NOTCH4Q99466 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.41■□□□□ 0.86
NOTCH4Q99466 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NOTCH4Q99466 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.4■□□□□ 0.86
NOTCH4Q99466 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.4■□□□□ 0.86
NOTCH4Q99466 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.4■□□□□ 0.86
NOTCH4Q99466 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NOTCH4Q99466 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.4■□□□□ 0.86
NOTCH4Q99466 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.4■□□□□ 0.86
NOTCH4Q99466 AP000692.2-201ENST00000608391 879 ntBASIC20.4■□□□□ 0.86
NOTCH4Q99466 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 KRT8P8-201ENST00000434750 1448 ntBASIC20.4■□□□□ 0.86
NOTCH4Q99466 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.4■□□□□ 0.86
NOTCH4Q99466 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NOTCH4Q99466 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NOTCH4Q99466 AC004951.3-201ENST00000418645 1148 ntBASIC20.39■□□□□ 0.86
NOTCH4Q99466 LIN28AP1-201ENST00000429574 405 ntBASIC20.39■□□□□ 0.86
NOTCH4Q99466 AC128688.1-201ENST00000487626 519 ntBASIC20.39■□□□□ 0.86
NOTCH4Q99466 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.39■□□□□ 0.86
NOTCH4Q99466 AL590326.2-201ENST00000625139 305 ntBASIC20.39■□□□□ 0.86
NOTCH4Q99466 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NOTCH4Q99466 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NOTCH4Q99466 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.39■□□□□ 0.86
NOTCH4Q99466 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NOTCH4Q99466 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NOTCH4Q99466 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.39■□□□□ 0.86
NOTCH4Q99466 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NOTCH4Q99466 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NOTCH4Q99466 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.39■□□□□ 0.86
NOTCH4Q99466 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NOTCH4Q99466 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NOTCH4Q99466 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NOTCH4Q99466 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.39■□□□□ 0.85
NOTCH4Q99466 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NOTCH4Q99466 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.39■□□□□ 0.85
NOTCH4Q99466 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NOTCH4Q99466 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.39■□□□□ 0.85
NOTCH4Q99466 AC117947.1-201ENST00000427448 529 ntBASIC20.39■□□□□ 0.85
NOTCH4Q99466 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.39■□□□□ 0.85
NOTCH4Q99466 EGLN1P1-201ENST00000531623 762 ntBASIC20.39■□□□□ 0.85
NOTCH4Q99466 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NOTCH4Q99466 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.38■□□□□ 0.85
NOTCH4Q99466 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 HMGA1P5-201ENST00000412453 271 ntBASIC20.38■□□□□ 0.85
NOTCH4Q99466 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 AC008040.2-201ENST00000461049 708 ntBASIC20.38■□□□□ 0.85
NOTCH4Q99466 AC063952.2-201ENST00000498792 1227 ntBASIC20.38■□□□□ 0.85
NOTCH4Q99466 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.38■□□□□ 0.85
NOTCH4Q99466 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NOTCH4Q99466 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NOTCH4Q99466 MFAP1P1-201ENST00000442257 1255 ntBASIC20.37■□□□□ 0.85
NOTCH4Q99466 FAM207BP-201ENST00000447172 505 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms