Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 AL121829.2-201ENST00000620908 328 ntBASIC15.33■□□□□ 0.04
DUX3Q96PT4 AL121906.2-201ENST00000621597 723 ntBASIC15.33■□□□□ 0.04
DUX3Q96PT4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.33■□□□□ 0.04
DUX3Q96PT4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 NBPF21P-201ENST00000425093 1451 ntBASIC15.33■□□□□ 0.04
DUX3Q96PT4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUX3Q96PT4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
DUX3Q96PT4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUX3Q96PT4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 AC233702.5-201ENST00000584107 538 ntBASIC15.31■□□□□ 0.04
DUX3Q96PT4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUX3Q96PT4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DUX3Q96PT4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DUX3Q96PT4 AL049637.2-201ENST00000641778 930 ntBASIC15.3■□□□□ 0.04
DUX3Q96PT4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUX3Q96PT4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms