Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASD1Q96PB1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.12■□□□□ 0.97
CASD1Q96PB1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.12■□□□□ 0.97
CASD1Q96PB1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CASD1Q96PB1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASD1Q96PB1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASD1Q96PB1 TMEM179-206ENST00000616017 1645 ntBASIC21.11■□□□□ 0.97
CASD1Q96PB1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.11■□□□□ 0.97
CASD1Q96PB1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CASD1Q96PB1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.11■□□□□ 0.97
CASD1Q96PB1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.11■□□□□ 0.97
CASD1Q96PB1 AC011298.2-201ENST00000617989 482 ntBASIC21.11■□□□□ 0.97
CASD1Q96PB1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CASD1Q96PB1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CASD1Q96PB1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CASD1Q96PB1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 SLC25A1P4-201ENST00000567977 778 ntBASIC21.1■□□□□ 0.97
CASD1Q96PB1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CASD1Q96PB1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 BX119927.1-201ENST00000636596 1552 ntBASIC21.1■□□□□ 0.97
CASD1Q96PB1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.1■□□□□ 0.97
CASD1Q96PB1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASD1Q96PB1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASD1Q96PB1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASD1Q96PB1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CASD1Q96PB1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASD1Q96PB1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CASD1Q96PB1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASD1Q96PB1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 AC004951.3-201ENST00000418645 1148 ntBASIC21.09■□□□□ 0.97
CASD1Q96PB1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 FAM87A-204ENST00000613235 858 ntBASIC21.09■□□□□ 0.97
CASD1Q96PB1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 AC006011.2-201ENST00000621313 1158 ntBASIC21.09■□□□□ 0.97
CASD1Q96PB1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.09■□□□□ 0.97
CASD1Q96PB1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CASD1Q96PB1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASD1Q96PB1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASD1Q96PB1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.08■□□□□ 0.97
CASD1Q96PB1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASD1Q96PB1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.08■□□□□ 0.97
CASD1Q96PB1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASD1Q96PB1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASD1Q96PB1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CASD1Q96PB1 LIN28AP1-201ENST00000429574 405 ntBASIC21.08■□□□□ 0.97
CASD1Q96PB1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.08■□□□□ 0.97
CASD1Q96PB1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASD1Q96PB1 NTF6B-201ENST00000591913 560 ntBASIC21.08■□□□□ 0.97
CASD1Q96PB1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CASD1Q96PB1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASD1Q96PB1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CASD1Q96PB1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CASD1Q96PB1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 AC128688.1-201ENST00000487626 519 ntBASIC21.07■□□□□ 0.96
CASD1Q96PB1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASD1Q96PB1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CASD1Q96PB1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CASD1Q96PB1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms