Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL21A1Q96P44 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL21A1Q96P44 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.6■□□□□ 0.57
COL21A1Q96P44 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 AC098818.2-201ENST00000564925 2320 ntBASIC18.6■□□□□ 0.57
COL21A1Q96P44 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.6■□□□□ 0.57
COL21A1Q96P44 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.6■□□□□ 0.57
COL21A1Q96P44 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.6■□□□□ 0.57
COL21A1Q96P44 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COL21A1Q96P44 MYC-209ENST00000641252 345 ntBASIC18.6■□□□□ 0.57
COL21A1Q96P44 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.6■□□□□ 0.57
COL21A1Q96P44 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.6■□□□□ 0.57
COL21A1Q96P44 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL21A1Q96P44 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL21A1Q96P44 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL21A1Q96P44 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL21A1Q96P44 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL21A1Q96P44 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL21A1Q96P44 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL21A1Q96P44 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL21A1Q96P44 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL21A1Q96P44 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL21A1Q96P44 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL21A1Q96P44 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.58■□□□□ 0.56
COL21A1Q96P44 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.58■□□□□ 0.56
COL21A1Q96P44 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.58■□□□□ 0.56
COL21A1Q96P44 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COL21A1Q96P44 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL21A1Q96P44 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.58■□□□□ 0.56
COL21A1Q96P44 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL21A1Q96P44 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL21A1Q96P44 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL21A1Q96P44 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL21A1Q96P44 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL21A1Q96P44 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 AC083880.1-201ENST00000608266 535 ntBASIC18.57■□□□□ 0.56
COL21A1Q96P44 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL21A1Q96P44 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL21A1Q96P44 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms