Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 AP001271.2-201ENST00000624018 1556 ntBASIC20.34■□□□□ 0.85
RPRD1AQ96P16 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RPRD1AQ96P16 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.33■□□□□ 0.85
RPRD1AQ96P16 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPRD1AQ96P16 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPRD1AQ96P16 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.33■□□□□ 0.84
RPRD1AQ96P16 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RPRD1AQ96P16 TCF3P1-201ENST00000423021 1937 ntBASIC20.33■□□□□ 0.84
RPRD1AQ96P16 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RPRD1AQ96P16 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RPRD1AQ96P16 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 AC066615.1-201ENST00000640911 628 ntBASIC20.32■□□□□ 0.84
RPRD1AQ96P16 AP006294.2-201ENST00000641667 209 ntBASIC20.32■□□□□ 0.84
RPRD1AQ96P16 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPRD1AQ96P16 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 AC004264.1-201ENST00000608354 794 ntBASIC20.31■□□□□ 0.84
RPRD1AQ96P16 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RPRD1AQ96P16 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 PCDHAC2-203ENST00000615316 3011 ntBASIC20.3■□□□□ 0.84
RPRD1AQ96P16 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPRD1AQ96P16 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPRD1AQ96P16 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.29■□□□□ 0.84
RPRD1AQ96P16 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPRD1AQ96P16 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPRD1AQ96P16 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPRD1AQ96P16 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPRD1AQ96P16 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPRD1AQ96P16 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.29■□□□□ 0.84
RPRD1AQ96P16 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms