Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF48Q96MX3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF48Q96MX3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF48Q96MX3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF48Q96MX3 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 LINC01006-201ENST00000333319 2292 ntBASIC16.05■□□□□ 0.16
ZNF48Q96MX3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF48Q96MX3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 RCN1P1-201ENST00000400413 996 ntBASIC16.04■□□□□ 0.16
ZNF48Q96MX3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 AL031963.3-201ENST00000606441 850 ntBASIC16.04■□□□□ 0.16
ZNF48Q96MX3 AC073195.1-201ENST00000607241 877 ntBASIC16.04■□□□□ 0.16
ZNF48Q96MX3 AC004264.1-201ENST00000608354 794 ntBASIC16.04■□□□□ 0.16
ZNF48Q96MX3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF48Q96MX3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 KRT8P20-201ENST00000423953 1409 ntBASIC16.03■□□□□ 0.16
ZNF48Q96MX3 AC073314.1-201ENST00000568729 2216 ntBASIC16.03■□□□□ 0.16
ZNF48Q96MX3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 AC020907.5-201ENST00000624372 1936 ntBASIC16.03■□□□□ 0.16
ZNF48Q96MX3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ZNF48Q96MX3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 MMP23A-201ENST00000234610 1017 ntBASIC16.02■□□□□ 0.16
ZNF48Q96MX3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF48Q96MX3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF48Q96MX3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ZNF48Q96MX3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF48Q96MX3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF48Q96MX3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms