Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 AC011506.1-201ENST00000474329 610 ntBASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC74BQ96LY2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 SLC25A3P1-201ENST00000443844 931 ntBASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 AL049597.2-201ENST00000565575 961 ntBASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 DGCR10-201ENST00000609839 495 ntBASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC74BQ96LY2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 TERF1P1-201ENST00000311003 1181 ntBASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 AL137013.1-201ENST00000432946 1228 ntBASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 KRT18P35-201ENST00000510488 1269 ntBASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC74BQ96LY2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC74BQ96LY2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC74BQ96LY2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CCDC74BQ96LY2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 AC097488.1-201ENST00000507834 756 ntBASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 C2orf69P3-201ENST00000565542 1120 ntBASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 AP005242.2-201ENST00000580065 1175 ntBASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC74BQ96LY2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CCDC74BQ96LY2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC74BQ96LY2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC74BQ96LY2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC74BQ96LY2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC74BQ96LY2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms