Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 AC137761.2-201ENST00000561729 223 ntBASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 AC145350.3-201ENST00000569033 163 ntBASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 AL356652.1-201ENST00000615962 565 ntBASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SLC47A1Q96FL8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 MIR935-201ENST00000401179 91 ntBASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 AL591742.1-201ENST00000604433 565 ntBASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC47A1Q96FL8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 KRT18P5-201ENST00000436075 1291 ntBASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 LINC01465-201ENST00000408887 1940 ntBASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC47A1Q96FL8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 AC087633.2-202ENST00000565166 1439 ntBASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms