Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF25Q96BH1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF25Q96BH1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF25Q96BH1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF25Q96BH1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF25Q96BH1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF25Q96BH1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF25Q96BH1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF25Q96BH1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF25Q96BH1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RNF25Q96BH1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF25Q96BH1 AC004408.2-201ENST00000623613 2777 ntBASIC20.67■□□□□ 0.9
RNF25Q96BH1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF25Q96BH1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF25Q96BH1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF25Q96BH1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF25Q96BH1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF25Q96BH1 MKRN4P-201ENST00000444706 1521 ntBASIC20.67■□□□□ 0.9
RNF25Q96BH1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF25Q96BH1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF25Q96BH1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF25Q96BH1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 MIR663A-201ENST00000385250 93 ntBASIC20.66■□□□□ 0.9
RNF25Q96BH1 AC026185.1-201ENST00000445748 174 ntBASIC20.66■□□□□ 0.9
RNF25Q96BH1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 AF201337.1-201ENST00000520239 748 ntBASIC20.66■□□□□ 0.9
RNF25Q96BH1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RNF25Q96BH1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF25Q96BH1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RNF25Q96BH1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF25Q96BH1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF25Q96BH1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF25Q96BH1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF25Q96BH1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RNF25Q96BH1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF25Q96BH1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF25Q96BH1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF25Q96BH1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF25Q96BH1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF25Q96BH1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF25Q96BH1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF25Q96BH1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF25Q96BH1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF25Q96BH1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF25Q96BH1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
RNF25Q96BH1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF25Q96BH1 BX276092.2-201ENST00000417668 665 ntBASIC20.64■□□□□ 0.89
RNF25Q96BH1 CROCCP5-201ENST00000436658 830 ntBASIC20.64■□□□□ 0.89
RNF25Q96BH1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF25Q96BH1 AC023632.3-201ENST00000521633 145 ntBASIC20.64■□□□□ 0.89
RNF25Q96BH1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF25Q96BH1 RAP2CP1-201ENST00000605103 478 ntBASIC20.64■□□□□ 0.89
RNF25Q96BH1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF25Q96BH1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms