Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 Z85996.1-201ENST00000494644 937 ntBASIC19.78■□□□□ 0.76
CLDN23Q96B33 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 AL441883.1-201ENST00000566170 1045 ntBASIC19.78■□□□□ 0.76
CLDN23Q96B33 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 AC140113.3-201ENST00000605663 199 ntBASIC19.78■□□□□ 0.76
CLDN23Q96B33 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.78■□□□□ 0.76
CLDN23Q96B33 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN23Q96B33 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN23Q96B33 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN23Q96B33 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN23Q96B33 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN23Q96B33 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN23Q96B33 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 AL024507.2-201ENST00000606070 2574 ntBASIC19.77■□□□□ 0.76
CLDN23Q96B33 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN23Q96B33 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN23Q96B33 HCG4P8-203ENST00000443049 980 ntBASIC19.77■□□□□ 0.76
CLDN23Q96B33 CA15P1-201ENST00000481698 905 ntBASIC19.77■□□□□ 0.76
CLDN23Q96B33 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN23Q96B33 PRSS44-201ENST00000515154 1146 ntBASIC19.77■□□□□ 0.76
CLDN23Q96B33 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 CLEC4GP1-201ENST00000596555 870 ntBASIC19.77■□□□□ 0.76
CLDN23Q96B33 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN23Q96B33 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN23Q96B33 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.75
CLDN23Q96B33 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 AL359075.1-203ENST00000462729 1002 ntBASIC19.76■□□□□ 0.75
CLDN23Q96B33 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN23Q96B33 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN23Q96B33 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 DPP3P2-201ENST00000416030 1696 ntBASIC19.75■□□□□ 0.75
CLDN23Q96B33 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN23Q96B33 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN23Q96B33 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
CLDN23Q96B33 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN23Q96B33 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN23Q96B33 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 PHGDH-210ENST00000641115 1638 ntBASIC19.74■□□□□ 0.75
CLDN23Q96B33 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms