Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 Z85996.1-201ENST00000494644 937 ntBASIC24.12■■□□□ 1.45
SNED1Q8TER0 FAM86EP-206ENST00000510506 987 ntBASIC24.12■■□□□ 1.45
SNED1Q8TER0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 SLC25A1P4-201ENST00000567977 778 ntBASIC24.12■■□□□ 1.45
SNED1Q8TER0 AL023803.3-201ENST00000615559 522 ntBASIC24.12■■□□□ 1.45
SNED1Q8TER0 AC010653.2-201ENST00000623505 997 ntBASIC24.12■■□□□ 1.45
SNED1Q8TER0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
SNED1Q8TER0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.12■■□□□ 1.45
SNED1Q8TER0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNED1Q8TER0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
SNED1Q8TER0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
SNED1Q8TER0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.11■■□□□ 1.45
SNED1Q8TER0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.11■■□□□ 1.45
SNED1Q8TER0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.11■■□□□ 1.45
SNED1Q8TER0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.11■■□□□ 1.45
SNED1Q8TER0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.11■■□□□ 1.45
SNED1Q8TER0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
SNED1Q8TER0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SNED1Q8TER0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SNED1Q8TER0 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 SLC25A1P2-201ENST00000430693 912 ntBASIC24.1■■□□□ 1.45
SNED1Q8TER0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 KRT18P56-201ENST00000507275 550 ntBASIC24.1■■□□□ 1.45
SNED1Q8TER0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SNED1Q8TER0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SNED1Q8TER0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SNED1Q8TER0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
SNED1Q8TER0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SNED1Q8TER0 PLK5-205ENST00000642079 1969 ntBASIC24.1■■□□□ 1.45
SNED1Q8TER0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SNED1Q8TER0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 AC004951.3-201ENST00000418645 1148 ntBASIC24.1■■□□□ 1.45
SNED1Q8TER0 TSPY5P-201ENST00000426936 936 ntBASIC24.1■■□□□ 1.45
SNED1Q8TER0 KRT126P-201ENST00000549467 1181 ntBASIC24.1■■□□□ 1.45
SNED1Q8TER0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.1■■□□□ 1.45
SNED1Q8TER0 AL121956.5-201ENST00000625261 221 ntBASIC24.1■■□□□ 1.45
SNED1Q8TER0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNED1Q8TER0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNED1Q8TER0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNED1Q8TER0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNED1Q8TER0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNED1Q8TER0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNED1Q8TER0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNED1Q8TER0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNED1Q8TER0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.09■■□□□ 1.45
SNED1Q8TER0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.09■■□□□ 1.45
SNED1Q8TER0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
SNED1Q8TER0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SNED1Q8TER0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SNED1Q8TER0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.08■■□□□ 1.45
SNED1Q8TER0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
SNED1Q8TER0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SNED1Q8TER0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.08■■□□□ 1.45
SNED1Q8TER0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SNED1Q8TER0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SNED1Q8TER0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SNED1Q8TER0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SNED1Q8TER0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 AC116562.4-202ENST00000641738 218 ntBASIC24.08■■□□□ 1.44
SNED1Q8TER0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SNED1Q8TER0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
SNED1Q8TER0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.07■■□□□ 1.44
SNED1Q8TER0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.07■■□□□ 1.44
SNED1Q8TER0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SNED1Q8TER0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SNED1Q8TER0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SNED1Q8TER0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.07■■□□□ 1.44
SNED1Q8TER0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.07■■□□□ 1.44
SNED1Q8TER0 COX11P1-201ENST00000489116 835 ntBASIC24.07■■□□□ 1.44
SNED1Q8TER0 AC141257.4-201ENST00000634557 245 ntBASIC24.07■■□□□ 1.44
SNED1Q8TER0 AC136944.6-201ENST00000634818 245 ntBASIC24.07■■□□□ 1.44
SNED1Q8TER0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms