Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AC116351.2-201ENST00000606540 1585 ntBASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AC104692.2-201ENST00000603054 253 ntBASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AL732292.2-201ENST00000609649 430 ntBASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AC131212.4-201ENST00000623606 975 ntBASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AL136038.3-201ENST00000561909 1096 ntBASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 IFNL4P1-201ENST00000607083 540 ntBASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.37□□□□□ -0.27
ALMS1Q8TCU4 KRT8P17-201ENST00000453110 1448 ntBASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 NPAP1P7-201ENST00000613027 823 ntBASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ALMS1Q8TCU4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 PRSS44-201ENST00000515154 1146 ntBASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 CKBP1-201ENST00000565489 1086 ntBASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 AL645929.1-201ENST00000420084 975 ntBASIC13.35□□□□□ -0.27
ALMS1Q8TCU4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 AP000523.1-201ENST00000398242 1049 ntBASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms