Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC009237.14-201ENST00000609975 1594 ntBASIC20.89■□□□□ 0.94
UBA3Q8TBC4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UBA3Q8TBC4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBA3Q8TBC4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 ITM2C-210ENST00000620962 501 ntBASIC20.89■□□□□ 0.93
UBA3Q8TBC4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
UBA3Q8TBC4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 AL023875.1-201ENST00000640777 796 ntBASIC20.88■□□□□ 0.93
UBA3Q8TBC4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA3Q8TBC4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 SLC25A24-204ENST00000569674 2357 ntBASIC20.87■□□□□ 0.93
UBA3Q8TBC4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 RN7SL471P-201ENST00000580476 299 ntBASIC20.87■□□□□ 0.93
UBA3Q8TBC4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.87■□□□□ 0.93
UBA3Q8TBC4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 AC125437.2-201ENST00000625180 2167 ntBASIC20.87■□□□□ 0.93
UBA3Q8TBC4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBA3Q8TBC4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 PRORSD1P-201ENST00000295112 541 ntBASIC20.86■□□□□ 0.93
UBA3Q8TBC4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.86■□□□□ 0.93
UBA3Q8TBC4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA3Q8TBC4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms