Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 AC005829.2-201ENST00000571422 1056 ntBASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMARCC2Q8TAQ2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 PHGDH-210ENST00000641115 1638 ntBASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 AC006557.6-201ENST00000623071 864 ntBASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC2Q8TAQ2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC2Q8TAQ2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC2Q8TAQ2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 AC128676.1-201ENST00000454392 318 ntBASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC2Q8TAQ2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 AC008687.6-201ENST00000596318 630 ntBASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms