Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC092368.3-202ENST00000574180 1591 ntBASIC18.46■□□□□ 0.55
NUP43Q8NFH3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 AC018553.1-201ENST00000616682 1458 ntBASIC18.46■□□□□ 0.54
NUP43Q8NFH3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 AC083880.1-201ENST00000608266 535 ntBASIC18.45■□□□□ 0.54
NUP43Q8NFH3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.45■□□□□ 0.54
NUP43Q8NFH3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NUP43Q8NFH3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 AC116351.2-201ENST00000606540 1585 ntBASIC18.44■□□□□ 0.54
NUP43Q8NFH3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 AC069152.1-201ENST00000438030 544 ntBASIC18.44■□□□□ 0.54
NUP43Q8NFH3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 AC142086.2-201ENST00000569753 217 ntBASIC18.44■□□□□ 0.54
NUP43Q8NFH3 AC060766.5-201ENST00000590539 871 ntBASIC18.44■□□□□ 0.54
NUP43Q8NFH3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.44■□□□□ 0.54
NUP43Q8NFH3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.43■□□□□ 0.54
NUP43Q8NFH3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 PNMA6B-201ENST00000538162 1200 ntBASIC18.42■□□□□ 0.54
NUP43Q8NFH3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms