Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.17■■□□□ 1.14
SLC17A8Q8NDX2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC17A8Q8NDX2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC17A8Q8NDX2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC17A8Q8NDX2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.17■■□□□ 1.14
SLC17A8Q8NDX2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.17■■□□□ 1.14
SLC17A8Q8NDX2 PTBP1P-201ENST00000554374 1601 ntBASIC22.17■■□□□ 1.14
SLC17A8Q8NDX2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.17■■□□□ 1.14
SLC17A8Q8NDX2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC17A8Q8NDX2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 KRT8P20-201ENST00000423953 1409 ntBASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 MTDHP1-201ENST00000605323 784 ntBASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 AL031963.3-201ENST00000606441 850 ntBASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.15■■□□□ 1.14
SLC17A8Q8NDX2 KRT8P17-201ENST00000453110 1448 ntBASIC22.14■■□□□ 1.14
SLC17A8Q8NDX2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
SLC17A8Q8NDX2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.14■■□□□ 1.14
SLC17A8Q8NDX2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
SLC17A8Q8NDX2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC17A8Q8NDX2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 AL691432.3-201ENST00000621860 400 ntBASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 AL162377.1-201ENST00000618844 1793 ntBASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLC17A8Q8NDX2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC17A8Q8NDX2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC17A8Q8NDX2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC17A8Q8NDX2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.12■■□□□ 1.13
SLC17A8Q8NDX2 KRT18P22-201ENST00000402024 1347 ntBASIC22.12■■□□□ 1.13
SLC17A8Q8NDX2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms