Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 AL032819.2-201ENST00000624543 2162 ntBASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 AP001271.2-201ENST00000624018 1556 ntBASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 AC087633.2-202ENST00000565166 1439 ntBASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 SLC7A5P1-201ENST00000568957 537 ntBASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 AL136967.2-201ENST00000623968 743 ntBASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 AC008406.3-201ENST00000620001 1374 ntBASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC71LQ8N9Z2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC71LQ8N9Z2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC71LQ8N9Z2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC71LQ8N9Z2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC71LQ8N9Z2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC71LQ8N9Z2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC71LQ8N9Z2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC71LQ8N9Z2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms