Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 RNF165-205ENST00000588679 2904 ntBASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 BX119927.1-201ENST00000636596 1552 ntBASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 AFG3L1P-217ENST00000557444 2447 ntBASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 AC093827.2-201ENST00000512654 315 ntBASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH20Q8N6Y1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH20Q8N6Y1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 AC116351.2-201ENST00000606540 1585 ntBASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH20Q8N6Y1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH20Q8N6Y1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms