Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD1Q8N668 AF201337.1-201ENST00000520239 748 ntBASIC16.32■□□□□ 0.2
COMMD1Q8N668 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD1Q8N668 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD1Q8N668 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD1Q8N668 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
COMMD1Q8N668 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD1Q8N668 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.32■□□□□ 0.2
COMMD1Q8N668 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD1Q8N668 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 AC068338.2-201ENST00000563278 1430 ntBASIC16.31■□□□□ 0.2
COMMD1Q8N668 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.31■□□□□ 0.2
COMMD1Q8N668 AC083906.2-201ENST00000511578 360 ntBASIC16.31■□□□□ 0.2
COMMD1Q8N668 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.31■□□□□ 0.2
COMMD1Q8N668 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD1Q8N668 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD1Q8N668 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD1Q8N668 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD1Q8N668 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 CYP2T1P-201ENST00000432607 1285 ntBASIC16.3■□□□□ 0.2
COMMD1Q8N668 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD1Q8N668 CDV3P1-201ENST00000471403 739 ntBASIC16.3■□□□□ 0.2
COMMD1Q8N668 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 AC104771.1-201ENST00000603335 964 ntBASIC16.3■□□□□ 0.2
COMMD1Q8N668 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 HCG11-201ENST00000411553 5696 ntBASIC16.3■□□□□ 0.2
COMMD1Q8N668 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD1Q8N668 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD1Q8N668 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD1Q8N668 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COMMD1Q8N668 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 AL138781.2-201ENST00000617896 1843 ntBASIC16.29■□□□□ 0.2
COMMD1Q8N668 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms